Welcome to ABCOMICS
The African Bioinformatics Center for Omics (ABCOMICS) is a regional hub dedicated to advancing genomics and data science across Africa. We foster innovation, provide high-quality training, promote ethical data sharing, and support collaborative research that strengthens local capacity and drives impactful scientific discovery.
About Us
The African Bioinformatics Center for Omics (ABCOMICS) is a regional hub advancing omics research, innovation, and capacity building across Africa.
Who We Are
Based in Senegal, the African Bioinformatics Center for Omics (ABCOMICS) is a pioneering initiative founded by African scientists to address the critical need for genomic and data science infrastructure across the continent. Our multidisciplinary team brings together experts in bioinformatics, statistics, and software engineering, each with more than five years of experience in the field.
ABCOMICS is built on a collaborative model, uniting researchers, institutions, and policymakers to drive impactful science. We are committed to open science principles, equity, and leadership that reflect Africa’s scientific potential and research priorities.
Our Vision
Our vision is to become a world-class bioinformatics center recognized for scientific excellence, innovation, and sustainability. We aim to empower African researchers with the infrastructure, tools, and training they need to lead high-impact genomic and multi-omics research—locally and globally. Through strong ethics, data governance, and South–South and South–North collaboration, ABCOMICS will help shape the future of life sciences in Africa.
Our Mission
Our mission is to develop robust, African-led bioinformatics infrastructure and expertise that supports:
- Independent data generation, analysis, and storage within Africa
- Open and ethical sharing of omics data
- Training and mentoring of early-career scientists
- Development of research software and reproducible workflows
- Support for precision medicine, agriculture, and environmental genomics
Our Commitment
ABCOMICS is not just a center—it's a platform for transformation. We are committed to working with African institutions, governments, and international partners to advance data-driven science that is relevant, inclusive, and future-ready. Our goal is to foster a new generation of scientists and developers who will lead Africa into the era of precision science.
Our Services
ABCOMICS provides comprehensive, scalable, and context-aware bioinformatics services to support scientific discovery across Africa and beyond.
- Software Development: Design and deployment of scientific tools tailored to African research needs.
- Custom Pipelines: Reproducible and scalable workflows for genomics, proteomics, and more.
- Omics Analysis: End-to-end data analysis across genomic, transcriptomic, and metagenomic layers.
- Data Submission & Storage: Secure hosting and integration with global databases (e.g., ENA, GenBank).
- AI & Modeling: Machine learning and predictive analytics for high-throughput data.
- Data Sharing: FAIR-aligned systems for ethical and open access to research outputs.
- Clinical & Imaging Data: Integration of omics with clinical metadata and biomedical imaging.
- FAIR Data: Implementation of standards to ensure findability, accessibility, interoperability, and reusability.
- Training & Capacity: Practical courses, workshops, and fellowships to strengthen local expertise.
- Research Collaboration: Joint initiatives across Africa and with international partners to co-create impactful science.
Training & Capacity Building
ABCOMICS is committed to building local and regional expertise in bioinformatics, genomics, and data science through tailored training programs.
Training Coming Soon
We are currently designing our first round of training modules and fellowship programs. These will include hands-on workshops, tutorials, and online resources to support African researchers and students across multiple omics domains.
Stay tuned for updates. If you'd like to be notified when training opens, please contact us.
Working Groups
ABCOMICS operates through specialized, cross-functional working groups that collaborate to build scientific infrastructure, research capacity, and data governance across Africa.
Partnerships, Collaboration & Strategic Coordination
Coordinates engagement with African institutions and global partners to promote equitable scientific collaboration.
Bioinformatics Analysis & Research Support
Provides technical expertise and analytical support for multi-omics research projects.
Data Submission, Sharing & User Support
Supports users in submitting, formatting, and securely storing omics data in ABCOMICS repositories, ensuring compliance with metadata standards and FAIR principles.
Software Development
Designs, tests, and deploys robust scientific tools, databases, and custom pipelines tailored to African contexts.
Data Science, Statistics & Artificial Intelligence
Develops machine learning models and statistical frameworks to support genomic and population-scale research.
Training & Capacity Building
Organizes workshops, bootcamps, and fellowship programs to strengthen local and regional expertise in omics and data science.
Ethics, Legal & Data Governance
Ensures compliance with national and international standards in data ethics, privacy, consent, and sovereignty.
Communications, Outreach & Public Engagement
Promotes transparency, public trust, and community awareness about genomics and data science in Africa.
Our Members
Meet the core team of researchers, developers, data scientists, and collaborators powering ABCOMICS.
Karim Mané
Co-Founder & Coordinator
Bioinformatician & Research Software Engineer
Research & Scientific Activities
Advancing omics-driven research for Africa’s health, environment, and development.
No Active Research Projects at the Moment
While ABCOMICS is not currently running its own research studies, we are actively laying the foundations for future programs in areas such as infectious disease genomics, precision medicine, agricultural resilience, and biodiversity.
We welcome collaboration with academic institutions, research centers, and funding agencies interested in co-developing high-impact, Africa-led scientific projects.
Contact us to explore research opportunities and shape the next chapter of omics innovation in Africa.
Publications
Discover scientific outputs from ABCOMICS, including peer-reviewed articles, preprints, and project reports.
Strengthening Genomic Sovereignty in Africa: The African Bioinformatics Center (ABC) for Omics Project
Status: In Progress — Internal PDF version available
News & Announcements
Stay informed on our latest milestones, collaborations, training events, and scientific breakthroughs.
No Announcements Yet
We’re currently building the foundation of the ABCOMICS platform. Official announcements, collaborations, events, and press releases will appear here soon.
In the meantime, follow our updates via contact or social media, and be the first to learn about our upcoming milestones.
Contact Us
Get in touch with the ABCOMICS team for support, partnerships, or inquiries.